miRBase entry: cgr-mir-187

Stem-loop cgr-mir-187


Accession
MI0020431
Description
Cricetulus griseus cgr-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187


Sequence

6199 reads, 72 reads per million, 6 experiments
gaugcggguccucaggcuacaacacaggacccgggcgcuccucugaccccUCGUGUCUUGUGUUGCAGCCGgagggacgc
...(((..(((((.((((.(((((((((((.((((.(.((....)).).)))).))))))))))).)))).))))).)))

Structure
gau   gg     a    a           c    c c  c 
   gcg  uccuc ggcu caacacaggac cggg g uc u
   |||  ||||| |||| ||||||||||| |||| | ||  
   cgc  gggag CCGA GUUGUGUUCUG GCUc c ag c
---   -a     G    C           U    c c  u 


Annotation confidence Low
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Genome context
JH000234.1: 1449802-1449881 [-]

Database links

Mature cgr-miR-187

Accession MIMAT0023815
Description Cricetulus griseus cgr-miR-187 mature miRNA
Sequence 51 - UCGUGUCUUGUGUUGCAGCCG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75