miRBase entry: cgr-mir-1973

Stem-loop cgr-mir-1973


Accession
MI0020447
Description
Cricetulus griseus cgr-mir-1973 precursor miRNA


Sequence

4731 reads, 67 reads per million, 6 experiments
cccagugacagaguuaaacggcugcauuauccUGACCGUGCAAAGGUAGCauaaacacuu
...((((.....((((..(...(((((..........)))))..).)))).....)))).

Structure
ccc    acaga    aa ggc     uauc 
   agug     guua  c   ugcau    c
   ||||     ||||  |   |||||     
   ucac     CGAU  G   ACGUG    U
--u    aaaua    -G -AA     CCAG 


Annotation confidence Not enough data
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Genome context
JH000450.1: 1005041-1005100 [+]

Database links

Mature cgr-miR-1973

Accession MIMAT0023835
Description Cricetulus griseus cgr-miR-1973 mature miRNA
Sequence 33 - UGACCGUGCAAAGGUAGC - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75