miRBase entry: cgr-mir-331

Stem-loop cgr-mir-331


Accession
MI0020498
Description
Cricetulus griseus cgr-mir-331 precursor miRNA
Gene family
MIPF0000199; mir-331


Sequence

4857 reads, 51 reads per million, 6 experiments
uggguuuguuCUAGGUAUGGUCCCAGGGAUCccagaucaaaccagGCCCCUGGGCCUAUCCUAGAaccaaccua
((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).))))))

Structure
      u        U    U       AUC  agau 
uggguu guuCUAGG AUGG CCCAGGG   cc    c
|||||| |||||||| |||| |||||||   ||    a
auccaa caAGAUCC UAUC GGGUCCC   Gg    a
      c        -    C       --C  acca 


Annotation confidence Low
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Genome context
JH000270.1: 1491783-1491856 [-]

Database links

Mature cgr-miR-331-5p

Accession MIMAT0023916
Description Cricetulus griseus cgr-miR-331-5p mature miRNA
Sequence 11 - CUAGGUAUGGUCCCAGGGAUC - 31
Evidence experimental
Illumina [1]

Mature cgr-miR-331-3p

Accession MIMAT0023917
Description Cricetulus griseus cgr-miR-331-3p mature miRNA
Sequence 46 - GCCCCUGGGCCUAUCCUAGA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75