miRBase entry: cgr-mir-345

Stem-loop cgr-mir-345


Accession
MI0020504
Description
Cricetulus griseus cgr-mir-345 precursor miRNA
Gene family
MIPF0000189; mir-345


Sequence

7537 reads, 135 reads per million, 6 experiments
uccaggccuGCUGACUCCUAGUCCAGUGcuugugguggcuacugggcccugagcuaggggucuggaggccuggguuugau
(((((((((.(.((((((((((.(((.((((((((...)))).)))).))).)))))))))).).)))))))))......

Structure
------         G U          C   U    -    u 
      uccaggccu C GACUCCUAGU CAG Gcuu gugg  
      ||||||||| | |||||||||| ||| |||| |||| g
      ggguccgga g cuggggaucg guc cggg cauc  
uaguuu         g u          a   c    u    g 


Annotation confidence Low
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Genome context
JH000414.1: 1101289-1101368 [+]

Database links

Mature cgr-miR-345

Accession MIMAT0023925
Description Cricetulus griseus cgr-miR-345 mature miRNA
Sequence 10 - GCUGACUCCUAGUCCAGUG - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75