miRBase entry: cgr-mir-350

Stem-loop cgr-mir-350


Accession
MI0020508
Description
Cricetulus griseus cgr-mir-350 precursor miRNA
Gene family
MIPF0000245; mir-350


Sequence

10352 reads, 116 reads per million, 6 experiments
uacaagaguAAAGUGCAUGCGCUUUGGGACAgugaggaaaauagugUUCACAAAGCCCAUACACUUUCACccuuuaggag
...(((.((((((((.(((.(((((((((((.((.......)).))))).)))))).))).)))))).)).)))......

Structure
---uac   a  -      C   C      -     g  ag 
      aag gu AAAGUG AUG GCUUUG GGACA ug  g
      ||| || |||||| ||| |||||| ||||| ||  a
      uuc CA UUUCAC UAC CGAAAC CUUgu au  a
gaggau   c  C      A   C      A     g  aa 


Annotation confidence Low
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Genome context
JH000177.1: 67260-67339 [+]

Database links

Mature cgr-miR-350-5p

Accession MIMAT0023931
Description Cricetulus griseus cgr-miR-350-5p mature miRNA
Sequence 10 - AAAGUGCAUGCGCUUUGGGACA - 31
Evidence experimental
Illumina [1]

Mature cgr-miR-350-3p

Accession MIMAT0023932
Description Cricetulus griseus cgr-miR-350-3p mature miRNA
Sequence 47 - UUCACAAAGCCCAUACACUUUCAC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75