miRBase entry: cgr-mir-362

Stem-loop cgr-mir-362


Accession
MI0020510
Description
Cricetulus griseus cgr-mir-362 precursor miRNA
Gene family
MIPF0000209; mir-362


Sequence

7936 reads, 76 reads per million, 6 experiments
cuccucucgAAUCCUUGGAACCUAGGUGUGAGUGCugcuucagugcaacacaccuguucaaggauucaaagaggcugagc
..(((((.(((((((((((...((((((((.((((((...))))))..)))))))))))))))))))..)))))......

Structure
----cu     -c           ACC        -A      c 
      ccucu  gAAUCCUUGGA   UAGGUGUG  GUGCug  
      |||||  |||||||||||   ||||||||  |||||| u
      ggaga  cuuaggaacuu   guccacac  cgugac  
cgaguc     aa           ---        aa      u 


Annotation confidence Not enough data
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Genome context
JH000611.1: 85232-85311 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cgr-mir-362
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-362

Accession MIMAT0023934
Description Cricetulus griseus cgr-miR-362 mature miRNA
Sequence 10 - AAUCCUUGGAACCUAGGUGUGAGUGC - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75