miRBase entry: cgr-mir-9

Stem-loop cgr-mir-9


Accession
MI0020559
Description
Cricetulus griseus cgr-mir-9 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

4195 reads, 37 reads per million, 6 experiments
gaguuguuaUCUUUGGUUAUCUAGCUGUAUGaguguauuggucuucauaaagcuagauaaccgaaaguaaaaacuccuuc
(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).)))))....

Structure
----     g    C               G      u ua 
    gaguu uuaU UUUGGUUAUCUAGCU UAUGag g  u
    ||||| |||| ||||||||||||||| |||||| |  u
    cucaa aaug aagccaauagaucga auacuu c  g
cuuc     a    a               a      - ug 


Annotation confidence Low
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Genome context
JH000258.1: 941049-941128 [+]

Database links

Mature cgr-miR-9

Accession MIMAT0024008
Description Cricetulus griseus cgr-miR-9 mature miRNA
Sequence 10 - UCUUUGGUUAUCUAGCUGUAUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75