Stem-loop ggo-mir-548f

Accession

MI0020842

Description

Gorilla gorilla ggo-mir-548f precursor miRNA

Gene family

MIPF0000317; mir-548

Literature search

1 open access papers mention ggo-mir-548f
(2 sentences)

Sequence

auuuaaauauuaagcuagugCAAAAGUGAUCGUGGUUUUUGccauuacuuuugauggcaaaaacugcaauuguuuugcaccaaccuaauaacauuucuguuguauuaaaua
.................((((((((..(((.((((((((((((((((....)))))))))))))))).))).)))))))).......((((((....))))))........

Structure

--------------auuuaaauauuaagcua        GU   C                c 
                               gugCAAAA  GAU GUGGUUUUUGccauua u
                               ||||||||  ||| ||||||||||||||||  
                               cacguuuu  uua cgucaaaaacgguagu u
auaaauuauguugucuuuacaauaauccaac        -g   a                u 

Annotation confidence Not enough data

Genome context

chr7: 112426148-112426258 [+]

Mature ggo-miR-548f

• Accession: MIMAT0024294
• Description: Gorilla gorilla ggo-miR-548f mature miRNA
• Sequence: 21 - CAAAAGUGAUCGUGGUUUUUG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116