miRBase entry: mml-mir-378d

Stem-loop mml-mir-378d


Accession
MI0020861
Description
Macaca mulatta mml-mir-378d precursor miRNA
Gene family
MIPF0000168; mir-378

Literature search
1 open access papers mention mml-mir-378d
(2 sentences)

Sequence

101252 reads, 668 reads per million, 9 experiments
gcacuuggcccagaguucacacucagggcucauugcugccauuguuucugucuucguuccuguuguuauuACUGGACUUGGAGUCAGAAGCAgguucgaaucccaacuccac
(((...(((((.((((....)))).)))))...))).(((..((((((((.(((((.(((.((.......)).)))..))))).))))))))))).................

Structure
gcacuuggcccagaguucacacucagggcucauugcu   au        u     -u   u  ug 
                                     gcc  uguuucug cuucg  ucc gu  u
                                     |||  |||||||| |||||  ||| ||  u
                                     ugg  ACGAAGAC GAGGU  AGG CA  a
--------------------caccucaacccuaagcu   --        U     UC   U  uu 


Annotation confidence Not enough data
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Genome context
chr5: 6141470-6141581 [-]

Database links

Mature mml-miR-378d

Accession MIMAT0024313
Description Macaca mulatta mml-miR-378d mature miRNA
Sequence 71 - ACUGGACUUGGAGUCAGAAGCA - 92
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116