Stem-loop mes-MIR168a

Accession

MI0020963

Description

Manihot esculenta mes-MIR168a precursor miRNA

Gene family

MIPF0000081; MIR168

Literature search

4 open access papers mention mes-MIR168a
(12 sentences)

Sequence

uuaccggcggucucuaauUCGCUUGGUGCAGGUCGGGAAcugauuagcuucgcuugcauauguacguauauguuuucuccuuauuaugccagauggcaagucuugauugguugagaucggacagaagcgaauuggaucccgccuugcaucaacugaaucggagaccgcgguga
((((((.((((((((.(((((.((((((((((.(((((.((((((.(((((....(((((((....))))))).............((((....)))).((((.((((......)))))))).))))).)))))).))))).)))))))))).))))).))))))))))))))

Structure

      g        a     C          U     A      a     gcuugcauauguacguauauguuuucuccuuauuaugccagauggcaa    u    gg 
uuaccg cggucucu auUCG UUGGUGCAGG CGGGA cugauu gcuuc                                                gucu gauu  u
|||||| |||||||| ||||| |||||||||| ||||| |||||| |||||                                                |||| ||||   
aguggc gccagagg uaagu aacuacguuc gcccu gguuaa cgaag                                                cagg cuag  u
      -        c     c          c     a      g     -----------------------------------------------a    -    ag 

Annotation confidence Not enough data

Genome context

scaffold02477: 27011-27183 [-]

Mature mes-miR168a

• Accession: MIMAT0024414
• Description: Manihot esculenta mes-miR168a mature miRNA
• Sequence: 19 - UCGCUUGGUGCAGGUCGGGAA - 39
• Evidence: not_experimental

References

1. Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement
   "Amiteye S, Corral JM, Sharbel TF"
   African J Biotech. (2011) 10:2562-2573