Stem-loop sequence mes-MIR168a

Accession

MI0020963 (change log)

Description

Manihot esculenta miR168a stem-loop

Gene family

MIPF0000081; MIR168

Literature search

4 open access papers mention mes-MIR168a
(12 sentences)

Stem-loop

         g       ua     c          u     a ug   a     gcuugcauauguacguauauguuuucuccuuauua 
5' uuaccg cggucuc  auucg uuggugcagg cggga c  auu gcuuc                                   u
   |||||| |||||||  ||||| |||||||||| ||||| |  ||| |||||                                    
3' aguggc gccagag  uaagu aacuacguuc gcccu g  uaa cgaag                                   g
         -       gc     c          c     a gu   g     acaggcuagaguugguuaguucugaacgguagacc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold02477: 27011-27183 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0020963

Mature sequence mes-miR168a

• Accession: MIMAT0024414
• Sequence: 19 - ucgcuuggugcaggucgggaa - 39
• Evidence: not experimental

References

1. "Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement" Amiteye S, Corral JM, Sharbel TF African J Biotech. 10:(2011).