Stem-loop sequence mes-MIR399a

Accession

MI0020967 (change log)

Description

Manihot esculenta miR399a stem-loop

Gene family

MIPF0000015; MIR399

Literature search

6 open access papers mention mes-MIR399a
(8 sentences)

Stem-loop

        -cg            -   c     c        -     gaugaucacuauucac 
5' auggu   aggaauggcagg cga ucucc uuggcaaa cggau                c
   |||||   |||||||||||| ||| ||||| |||||||| |||||                 
3' uacua   ucuuuaccgucc guu agagg aaccguuu gucua                a
        uaa            c   a     a        c     auacguaauuaaacgu 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Cassava4): scaffold04003: 143-263 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0020967

Mature sequence mes-miR399a

• Accession: MIMAT0024418
• Sequence: 85 - ugccaaaggagaauugcccug - 105
• Evidence: not experimental

References

1. "Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement" Amiteye S, Corral JM, Sharbel TF African J Biotech. 10:(2011).