Stem-loop sequence mes-MIR408

Accession

MI0020968 (change log)

Description

Manihot esculenta miR408 stem-loop

Gene family

MIPF0000102; MIR408

Literature search

4 open access papers mention mes-MIR408
(12 sentences)

Stem-loop

   g    uaa         c    ---a   acu     c      a          aa   uu    caa 
5'  aggg   agaaagaga ggac    aag   gggaa aggcag gcaugggugg  cua  aaca   g
    ||||   ||||||||| ||||    |||   ||||| |||||| ||||||||||  |||  ||||    
3'  uccc   ucuuuuucu ucug    uuc   cccuu uccguc cguacccacc  gau  uugu   u
   -    ucg         -    ggcg   ggu     c      a          ac   -u    cua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold00080: 302009-302142 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0020968

Mature sequence mes-miR408

• Accession: MIMAT0024419
• Sequence: 88 - augcacugccucuucccuggc - 108
• Evidence: not experimental

References

1. "Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement" Amiteye S, Corral JM, Sharbel TF African J Biotech. 10:(2011).