miRBase entry: nta-MIR156f

Stem-loop nta-MIR156f


Accession
MI0021324
Description
Nicotiana tabacum nta-MIR156f precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
7 open access papers mention nta-MIR156f
(23 sentences)

Sequence

uuaaaggaggUGACAGAAGAGAAUGAGCACacaugguguuuucuuacaugagauauauauauucaugcuugaaacuaugcgugcucacucucuaucugucacccacuuucuuu
..((((..((((((((((((((.(((((((.((((((...(((...((((((.........))))))...))))))))).))))))).))))).)))))))))..))))....

Structure
--uu    ga         -     A       a      guu   uua      aua 
    aaag  ggUGACAGA AGAGA UGAGCAC cauggu   uuc   caugag   u
    ||||  ||||||||| ||||| ||||||| ||||||   |||   ||||||   a
    uuuc  ccacugucu ucucu acucgug guauca   aag   guacuu   u
uuuc    ac         a     c       c      ---   uuc      aua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR156f

Accession MIMAT0024634
Description Nicotiana tabacum nta-miR156f mature miRNA
Sequence 11 - UGACAGAAGAGAAUGAGCAC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28