Stem-loop hvu-MIR5049f

Accession

MI0021519

Description

Hordeum vulgare hvu-MIR5049f precursor miRNA

Gene family

MIPF0001200; MIR5067

Literature search

2 open access papers mention hvu-MIR5049f
(4 sentences)

Sequence

ugaaaaguuucuacuccccccgauccaaauuaauugacacugccuuaguucaacuuuuaguacaaaguuguacuaacgcagcgucAAUUAAUAUGGAUCGGAGGGAguacuuuugu
..((((((....((((((.((((((((.((((((((((.((((.(((((.(((((((......))))))).))))).)))).)))))))))).)))))))).))))))))))))..

Structure

ug      uucu      c        a          a    c     u       ua 
  aaaagu    acuccc ccgaucca auuaauugac cugc uuagu caacuuu  g
  ||||||    |||||| |||||||| |||||||||| |||| ||||| |||||||   
  uuuuca    ugAGGG GGCUAGGU UAAUUAAcug gacg aauca guugaaa  u
ug      ----      A        A          c    c     u       ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR5049f

• Accession: MIMAT0024829
• Description: Hordeum vulgare hvu-miR5049f mature miRNA
• Sequence: 86 - AAUUAAUAUGGAUCGGAGGGA - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984