miRBase entry: hvu-MIR6202

Stem-loop hvu-MIR6202


Accession
MI0021520
Description
Hordeum vulgare hvu-MIR6202 precursor miRNA


Sequence

cuaugugaugUGAAGAUUUUAAGCAUUGAAccugaucggcucgauguuugauacuucuguuguaauguuuagaaucuuuccggggnuuuucacauuc
..((((((((.((((((((((((((((((((..((..(..((((...))))..).)).))).))))))))))))))))).)).......))))))..

Structure
cu      -------  U                 -   cu  uc gc    u 
  auguga       ug GAAGAUUUUAAGCAUUG AAc  ga  g  ucga  
  ||||||       || ||||||||||||||||| |||  ||  |  |||| g
  uacacu       gc uuucuaagauuuguaau uug  cu  c  aguu  
cu      uuunggg  c                 g   -u  -u au    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6202

Accession MIMAT0024830
Description Hordeum vulgare hvu-miR6202 mature miRNA
Sequence 11 - UGAAGAUUUUAAGCAUUGAA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984