Stem-loop hvu-MIR6203

Accession

MI0021521

Description

Hordeum vulgare hvu-MIR6203 precursor miRNA

Sequence

ugugccgaauAGACGAUUAAGAAGACCUGCAAggccacauccaguuccaguugcaauacccaaaagaauauucuguugcuucgcugaucuaacacauugccuuuuuaucagaucaaacucuuuuccauguggacaacuugagcaacuguaauuuccaaagguauuuugacaugucccauugcaguaguuugguagugugcauucaucaauaucauguuccugaaugucccaugugcucuucuugauguccuuuuuucuccuuccucggcggu
..((((((...(((.((((((((((.(.(((.((..((((.(((...((((.((((((...............))))))...))))......(((((((((........(((......)))..(((....)))......((((.((((((((........((......)).......)))))))).)))))))))))))....................))).)))).)).)))).)))))))))))))...............))))))..

Structure

ug      ------------auA   G          C U   A  cc    c   uuccaguugcaauacccaaaagaauauucuguugcuucgcugaucuaa         uuuuuaucagaucaaacucuuuuccauguggacaacuu    a        uuccaaag  au 
  ugccga               GAC AUUAAGAAGA C GCA gg  acau cag                                                cacauugcc                                      gagc acuguaau        gu  u
  ||||||               ||| |||||||||| | ||| ||  |||| |||                                                |||||||||                                      |||| ||||||||        ||   
  gcggcu               cug uaguucuucu g ugu cc  ugua guc                                                gugugaugg                                      uuug ugacguua        ca  u
ug      ccuuccucuuuuuuc   -          c -   a  -c    a   ----------------------------cuuguacuauaacuacuuac         --------------------------------------    a        -cccugua  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR6203

• Accession: MIMAT0024831
• Description: Hordeum vulgare hvu-miR6203 mature miRNA
• Sequence: 11 - AGACGAUUAAGAAGACCUGCAA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984