miRBase entry: rno-mir-1306

Stem-loop rno-mir-1306


Accession
MI0021537
Description
Rattus norvegicus rno-mir-1306 precursor miRNA
Gene family
MIPF0000531; mir-1306

Literature search
2 open access papers mention rno-mir-1306
(12 sentences)

Sequence

2292 reads, 17 reads per million, 384 experiments
agucuccaCCACCUCCCCUGCAAACGUCCAgugaugcagagguaaugGACGUUGGCUCUGGUGGUGAUGgaca
.((((.(((((((......((.((((((((...((......))..)))))))).))...)))))))..)))).

Structure
a    -c       UCCCCU  A        gug  gc 
 gucu  caCCACC      GC AACGUCCA   au  a
 ||||  |||||||      || ||||||||   ||   
 cagG  GUGGUGG      CG UUGCAGgu   ug  g
a    UA       ---UCU  G        -aa  ga 


Annotation confidence High
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Genome context
chr11: 86857633-86857705 [+]

Database links

Mature rno-miR-1306-5p

Accession MIMAT0024851
Description Rattus norvegicus rno-miR-1306-5p mature miRNA
Sequence 9 - CCACCUCCCCUGCAAACGUCCA - 30
Evidence experimental
Illumina [1]

Mature rno-miR-1306-3p

Accession MIMAT0024852
Description Rattus norvegicus rno-miR-1306-3p mature miRNA
Sequence 48 - GACGUUGGCUCUGGUGGUGAUG - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22470567
    Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation
    Meng F, Hackenberg M, Li Z, Yan J, Chen T
    PLoS One (2012) 7:e34394