miRBase entry: mmu-mir-6240

Stem-loop mmu-mir-6240


Accession
MI0021587
Symbol
MGI: Mir6240
Description
Mus musculus mmu-mir-6240 precursor miRNA

Literature search
4 open access papers mention mmu-mir-6240
(11 sentences)

Sequence

6615 reads, 282 reads per million, 98 experiments
uugagaaaaacaaaaccaaaaaaccCCAAAGCAUCGCGAAGGCCCACGGCGgguguugacucgaugugauuucugcccagugcucugaaggucaaugugaagaaaugugacucucuu
..((((...(((....((....(((.((.(((((.((((((...((((.(((((....))))).)))).)))).))...))))).))..))).....))......)))...))))..

Structure
uu    aaa   --aaac  -aaaa   -C  A     --C  -    GCC    G     g 
  gaga   aca      ca     acc  CA AGCAU   GC GAAG   CACG CGggu u
  ||||   |||      ||     |||  || |||||   || ||||   |||| |||||  
  cucu   ugu      gu     ugg  gu ucgug   cg cuuu   gugu gcuca u
uu    cag   aaagaa  guaac   aa  c     acc  u    --a    a     g 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr5: 114851948-114852064 [+]

Database links

Mature mmu-miR-6240

Accession MIMAT0024861
Description Mus musculus mmu-miR-6240 mature miRNA
Sequence 26 - CCAAAGCAUCGCGAAGGCCCACGGCG - 51
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 22580345
    Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3Kalpha signaling in cardiac hypertrophy
    "Yang KC, Ku YC, Lovett M, Nerbonne JM"
    "J Mol Cell Cardiol (2012) 53:101-112