miRBase entry: osa-MIR6252

Stem-loop osa-MIR6252


Accession
MI0021602
Description
Oryza sativa osa-MIR6252 precursor miRNA


Sequence

4 reads, 3 reads per million, 2 experiments
gacgaggaugugaucccuccuaacauaacaaaucuagauaaccauuuaucuaaAUUCGUUGUAUUAAGAGAGGGUUaacccuugua
.((((((...(((((((((.(((.(((((.(((.(((((((....))))))).))).))))).))).))).))))))..)))))).

Structure
g      aug      -   c   c     a   c       c 
 acgagg   ugaucc cuc uaa auaac aau uagauaa c
 ||||||   |||||| ||| ||| ||||| ||| |||||||  
 uguucc   aUUGGG GAG AUU UGUUG UUA aucuauu a
a      -ca      A   A   A     C   a       u 


Annotation confidence Not enough data
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Genome context
Chr12: 18110544-18110629 [-]

Database links

Mature osa-miR6252

Accession MIMAT0024875
Description Oryza sativa osa-miR6252 mature miRNA
Sequence 54 - AUUCGUUGUAUUAAGAGAGGGUU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22585409
    Novel miRNAs in the control of arsenite levels in rice
    "Liu Q"
    "Funct Integr Genomics (2012) 12:649-658