miRBase entry: gma-MIR156u

Stem-loop gma-MIR156u


Accession
MI0021674
Description
Glycine max gma-MIR156u precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
40 open access papers mention gma-MIR156u
(162 sentences)

Sequence

gagagaggcUGACAGAAGAGAGUGAGCACauacuaguggagauuguaugagggcauacaauugcgggugcgugcucacuucucuaucugucagcuuccca
..(.(((((((((((((((((((((((((.((((.((...(((((((((....))))))))))).)))).)))))))).))))).)))))))))))).).

Structure
ga a            -     -        a    a  gga         a 
  g gaggcUGACAGA AGAGA GUGAGCAC uacu gu   gauuguaug g
  | |||||||||||| ||||| |||||||| |||| ||   |||||||||  
  c cuucgacugucu ucucu cacucgug gugg cg   uuaacauac g
-a c            a     u        c    g  ---         g 


Annotation confidence Not enough data
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Genome context
chr2: 38792955-38793054 [+]

Database links

Mature gma-miR156u

Accession MIMAT0024880
Description Glycine max gma-miR156u mature miRNA
Sequence 10 - UGACAGAAGAGAGUGAGCAC - 29
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169