miRBase entry: gma-MIR164i

Stem-loop gma-MIR164i


Accession
MI0021687
Description
Glycine max gma-MIR164i precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
17 open access papers mention gma-MIR164i
(37 sentences)

Sequence

uugugcaagaUGGAGAAGCAGGGCACGUGCAauacuaacucaugaacacuacacggggcgugaacucggagaaucauauucucuucugcuucauuucaccaacaagagagauccuauuaguuaguucuucaugugccccucuuccccaucaugacaa
.(((.((.(((((.((((..(((((((((....(((((((.(((..........((((((.((....(((((((...))))))))))))))).((((........)))).....))).)))))))....)))))))))..)))).))))).))))).

Structure
u   g  a     A    CA         CAau       c   ------------aacacuacac      u  acuc       c 
 ugu ca gaUGG GAAG  GGGCACGUG    acuaacu aug                      ggggcg ga    ggagaau  
 ||| || ||||| ||||  |||||||||    ||||||| |||                      |||||| ||    ||||||| a
 aca gu cuacc cuuc  cccguguac    ugauuga uau                      cuucgu cu    ucucuua  
a   -  a     c    uc         uucu       u   ccuagagagaacaaccacuuua      -  ----       u 


Annotation confidence Not enough data
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Genome context
chr18: 49506475-49506631 [+]

Database links

Mature gma-miR164i

Accession MIMAT0024893
Description Glycine max gma-miR164i mature miRNA
Sequence 11 - UGGAGAAGCAGGGCACGUGCA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169