miRBase entry: gma-MIR164j

Stem-loop gma-MIR164j


Accession
MI0021688
Description
Glycine max gma-MIR164j precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
17 open access papers mention gma-MIR164j
(37 sentences)

Sequence

aggucuugcUGGAGAAGCAGGGCACGUGCAacauuccugaugcuugcuccagcuuauuuugcacgugcucuccuuuuccagcuugauu
.((((..((((((((((.(((((((((((((.((..(((..(....)..)))...)).))))))))))))).))))))))))..))))

Structure
a    uu          C             c  -uc   au c 
 gguc  gcUGGAGAAG AGGGCACGUGCAa au   cug  g u
 ||||  |||||||||| ||||||||||||| ||   |||  |  
 uuag  cgaccuuuuc ucucgugcacguu ua   gac  c u
-    uu          c             u  uuc   cu g 


Annotation confidence Not enough data
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Genome context
chr19: 48278744-48278831 [+]

Database links

Mature gma-miR164j

Accession MIMAT0024894
Description Glycine max gma-miR164j mature miRNA
Sequence 10 - UGGAGAAGCAGGGCACGUGCA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169