Stem-loop sma-mir-3479

Accession

MI0021826

Description

Schistosoma mansoni sma-mir-3479 precursor miRNA

Gene family

MIPF0001629; mir-3479

Literature search

1 open access papers mention sma-mir-3479
(10 sentences)

Sequence

cauguuugugagggggauguuugugcaauuuaguguuguaaauaUAUUGCACUAACCUUCGCCUUGcaaauauagg
.((((((((((((.(((.(((.(((((((...(((((...)))))))))))).))).))).))))))))))))...

Structure

--c            g   u   u       uua     g 
   auguuugugagg gga guu gugcaau   guguu  
   |||||||||||| ||| ||| |||||||   ||||| u
   uauaaacGUUCC CUU CAA CACGUUA   Uauaa  
gga            G   C   U       ---     a 

Annotation confidence Not enough data

Genome context

Chr_4.unplaced.SC_0032: 1561284-1561359 [-]

Mature sma-miR-3479-3p

• Accession: MIMAT0025039
• Description: Schistosoma mansoni sma-miR-3479-3p mature miRNA
• Sequence: 45 - UAUUGCACUAACCUUCGCCUUG - 66
• Evidence: not_experimental

References

1. PubMed ID: 21640815
   Genome-wide identification of novel microRNAs and their target genes in the human parasite Schistosoma mansoni
   "de Souza Gomes M, Muniyappa MK, Carvalho SG, Guerra-Sa R, Spillane C"
   "Genomics (2011) 98:96-111