Stem-loop sequence ptc-MIR6462a

AccessionMI0021968 (change log)
DescriptionPopulus trichocarpa miR6462a stem-loop
Gene family MIPF0001393; MIR6462
Literature search

1 open access papers mention ptc-MIR6462a
(2 sentences)

Stem-loop 
       a      c   a                        uguac        ggaa  ggaa  ga 
5' augg ugggau agc aggggcaaagaugcauaagagaga     aaggguag    gg    ga  a
   |||| |||||| ||| ||||||||||||||||||||||||     ||||||||    ||    ||   
3' uacc acucug ucg ucccuguuuuuacguauucucuuu     uucccauc    cu    cu  a
       c      a   c                        --uuc        --ag  auag  ag
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000340.2: 2221706-2221837 [+]
intergenic
Database links

Mature sequence ptc-miR6462a

Accession MIMAT0025188
Sequence

95 -  

ucucuuaugcauuuuuguccc

 - 115

Get sequence
Evidence experimental; miRNAseq [1], Illumina [2]

References

1
PMID:22442676 "Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets" Puzey JR, Karger A, Axtell M, Kramer EM PLoS One. 7:e33034(2012).
2
PMID:23570526 "Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis" Shuai P, Liang D, Zhang Z, Yin W, Xia X BMC Genomics. 14:233(2013).