Stem-loop mja-mir-6494

Accession

MI0022071

Description

Marsupenaeus japonicus mja-mir-6494 precursor miRNA

Sequence

gaguaggAGGGCGCGGUGGUGAGCGUAaaaggauacggcgcgagccggucuggagccgccacuggugcggaucuugggg
...(((((..(((((((((((.((......((((.((((....))))))))...))))))))).))))...)))))...

Structure

gag     -GG    -       A  GUAaaa    a    g 
   uaggA   GCGC GGUGGUG GC      ggau cggc c
   |||||   |||| ||||||| ||      |||| ||||  
   guucu   cgug ucaccgc cg      ucug gccg g
ggg     agg    g       -  ---agg    -    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature mja-miR-6494

• Accession: MIMAT0025303
• Description: Marsupenaeus japonicus mja-miR-6494 mature miRNA
• Sequence: 8 - AGGGCGCGGUGGUGAGCGUA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22545795
   Characterization of host microRNAs that respond to DNA virus infection in a crustacean
   Huang T, Xu D, Zhang X
   BMC Genomics (2012) 13:159