miRBase entry: ssc-mir-34c-2

Stem-loop ssc-mir-34c-2


Accession
MI0022128
Description
Sus scrofa ssc-mir-34c-2 precursor miRNA
Gene family
MIPF0000039; mir-34

Literature search
11 open access papers mention ssc-mir-34c-2
(137 sentences)

Sequence

5197 reads, 2544 reads per million, 10 experiments
ucuaguuacuAGGCAGUGUAGUUAGCUGAUUGCugauaaaaccaaucacuaaccacacggccagguaaaaagau
(((..(((((.(((.((((.(((((.((((((.(......).))))))))))).)))).))).)))))..))).

Structure
-   ag     A   A    A     C      C ga 
 ucu  uuacu GGC GUGU GUUAG UGAUUG u  u
 |||  ||||| ||| |||| ||||| |||||| |   
 aga  aaugg ccg caca caauc acuaac a  a
u   aa     a   g    c     -      c aa 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssc-miR-34c

Accession MIMAT0013916
Description Sus scrofa ssc-miR-34c mature miRNA
Sequence 11 - AGGCAGUGUAGUUAGCUGAUUGC - 33
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100