miRBase entry: ssc-mir-132

Stem-loop ssc-mir-132


Accession
MI0022129
Description
Sus scrofa ssc-mir-132 precursor miRNA
Gene family
MIPF0000065; mir-132

Literature search
8 open access papers mention ssc-mir-132
(14 sentences)

Sequence

31 reads, 41 reads per million, 8 experiments
cuccagggcaaccguggcuuucgauuguuacugugggaaccggaggUAACAGUCUACAGCCAUGGUCGccccgcagca
.....((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).)))).......

Structure
--cucca    a         uuc          -g   g 
       gggc accguggcu   gauuguuacu  ugg  
       |||| |||||||||   ||||||||||  ||| a
       cccG UGGUACCGA   CUGACAAUgg  gcc  
acgacgc    C         CAU          ag   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr12: 50015722-50015799 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-132
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ssc-miR-132

Accession MIMAT0025361
Description Sus scrofa ssc-miR-132 mature miRNA
Sequence 47 - UAACAGUCUACAGCCAUGGUCG - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328