miRBase entry: ssc-mir-150-1

Stem-loop ssc-mir-150-1


Accession
MI0022133
Description
Sus scrofa ssc-mir-150-1 precursor miRNA
Gene family
MIPF0000197; mir-150

Literature search
10 open access papers mention ssc-mir-150-1
(27 sentences)

Sequence

3 reads, 9 reads per million, 2 experiments
cucggcccuaUCUCCCAACCCUUGUACCAGUGcgugccucagucccugguacaggaauggggggcagggaccugggg
(((((((((.(((((((..(((.(((((((.((........))..))))))))))..))))))).)))).)).))).

Structure
-   -  -    a       AC   U       -U  gug 
 cuc gg cccu UCUCCCA  CCU GUACCAG  Gc   c
 ||| || |||| |||||||  ||| |||||||  ||    
 ggg cc ggga ggggggu  gga caugguc  ug   c
g   u  a    c       aa   -       cc  acu 


Annotation confidence Not enough data
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Genome context
chr6: 50309879-50309955 [-]

Database links

Mature ssc-miR-150

Accession MIMAT0025365
Description Sus scrofa ssc-miR-150 mature miRNA
Sequence 11 - UCUCCCAACCCUUGUACCAGUG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328