miRBase entry: ssc-mir-190a

Stem-loop ssc-mir-190a


Accession
MI0022136
Description
Sus scrofa ssc-mir-190a precursor miRNA
Gene family
MIPF0000076; mir-190

Literature search
1 open access papers mention ssc-mir-190a
(1 sentences)

Sequence

98 reads, 65 reads per million, 10 experiments
ggccucugugUGAUAUGUUUGAUAUAUUAGGuuguuauuuaauccaacuauauaucaaacauauuccuacagugucuugccc
((((.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).)....))).

Structure
-   ---- u     -U                UA     uuau 
 ggc    c cugug  GAUAUGUUUGAUAUAU  GGuug    u
 |||    | |||||  ||||||||||||||||  |||||     
 ccg    g gacau  uuauacaaacuauaua  ucaac    u
c   uucu u     cc                --     cuaa 


Annotation confidence Not enough data
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Genome context
chr1: 120448012-120448093 [-]

Database links

Mature ssc-miR-190a

Accession MIMAT0025367
Description Sus scrofa ssc-miR-190a mature miRNA
Sequence 11 - UGAUAUGUUUGAUAUAUUAGG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328