miRBase entry: ssc-mir-216-2

Stem-loop ssc-mir-216-2


Accession
MI0022141
Description
Sus scrofa ssc-mir-216-2 precursor miRNA
Gene family
MIPF0000054; mir-216

Literature search
4 open access papers mention ssc-mir-216-2
(6 sentences)

Sequence

1 reads, 2 reads per million, 1 experiments
ugaguuggcuUAAUCUCAGCUGGCAACUGUGAGauguucauacaaucccccacaguggucucugggauuaugcuaaacagag
....(((((.(((((((((..(((.((((((.(((((....)).)))...)))))).))).))))))))).)))))......

Structure
--ugag     u         CU   A      --A   -  u 
      uuggc UAAUCUCAG  GGC ACUGUG   Gau gu c
      ||||| |||||||||  ||| ||||||   ||| ||  
      aaucg auuaggguc  cug ugacac   cua ca a
gagaca     u         -u   g      ccc   a  u 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssc-miR-216

Accession MIMAT0002130
Description Sus scrofa ssc-miR-216 mature miRNA
Sequence 11 - UAAUCUCAGCUGGCAACUGUGAG - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328