miRBase entry: ssc-mir-345-2

Stem-loop ssc-mir-345-2


Accession
MI0022146
Description
Sus scrofa ssc-mir-345-2 precursor miRNA
Gene family
MIPF0000189; mir-345

Literature search
4 open access papers mention ssc-mir-345-2
(5 sentences)

Sequence

20 reads, 26 reads per million, 7 experiments
acccaggucuGCUGACUCCUAGUCCAGUGCuugugauggcuggugggCCCUGAACUAGGGGUCUGGAGgccuggguuu
((((((((((.(.((((((((((.(((.((((((........)))))).))).)))))))))).).))))))))))..

Structure
--          G U          C   U      gau 
  acccaggucu C GACUCCUAGU CAG GCuugu   g
  |||||||||| | |||||||||| ||| ||||||    
  uggguccgGA G CUGGGGAUCA GUC Cgggug   g
uu          G U          A   C      guc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssc-miR-345-5p

Accession MIMAT0013899
Description Sus scrofa ssc-miR-345-5p mature miRNA
Sequence 11 - GCUGACUCCUAGUCCAGUGC - 30
Evidence experimental
Illumina [1-2]

Mature ssc-miR-345-3p

Accession MIMAT0013900
Description Sus scrofa ssc-miR-345-3p mature miRNA
Sequence 48 - CCCUGAACUAGGGGUCUGGAG - 68
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100