miRBase entry: ssc-mir-3613

Stem-loop ssc-mir-3613


Accession
MI0022161
Description
Sus scrofa ssc-mir-3613 precursor miRNA
Gene family
MIPF0001411; mir-3613

Literature search
2 open access papers mention ssc-mir-3613
(2 sentences)

Sequence

216 reads, 110 reads per million, 14 experiments
ggguuuggauUGUUGUACUUUUUUUUUUGUucguugcauuuuuaggaacaaaaaaaaaagcccaacccuucacaccg
.(((.((((..((((..(((((((((((((((.(.........).)))))))))))))))..))))..)))).))).

Structure
g   u    uU    UA               g ugc 
 ggu ugga  GUUG  CUUUUUUUUUUGUuc u   a
 ||| ||||  ||||  ||||||||||||||| |   u
 cca acuu  caac  gaaaaaaaaaacaag a   u
g   c    cc    cc               g uuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssc-miR-3613

Accession MIMAT0025387
Description Sus scrofa ssc-miR-3613 mature miRNA
Sequence 11 - UGUUGUACUUUUUUUUUUGU - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328