miRBase entry: tgu-mir-1467-1

Stem-loop tgu-mir-1467-1


Accession
MI0022176
Description
Taeniopygia guttata tgu-mir-1467-1 precursor miRNA
Gene family
MIPF0001416; mir-1467


Sequence

cagggcagguuuuuUUCUCAGCUACAUCGGUGUAAAUCcagagcaacuccacugagaUUCACACCAGAGUAACUGAGAGCagaaucuggccaa
..((.((((((((.(((((((.(((.(((((((.(((((((..........))).)))).))))).))))).))))))).)))))))).))..

Structure
ca  g        u       C   A  -     A    -   agca 
  gg cagguuuu UUCUCAG UAC UC GGUGU AAUC cag    a
  || |||||||| ||||||| ||| || ||||| |||| |||     
  cc gucuaaga GAGAGUC AUG AG CCACA UUag guc    c
aa  g        C       A   -  A     C    a   accu 


Annotation confidence Not enough data
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Genome context
chr2: 142442502-142442594 [-]

Database links

Mature tgu-miR-1467-5p

Accession MIMAT0025399
Description Taeniopygia guttata tgu-miR-1467-5p mature miRNA
Sequence 15 - UUCUCAGCUACAUCGGUGUAAAUC - 38
Evidence experimental
Illumina [2]

Mature tgu-miR-1467-3p

Accession MIMAT0027342
Description Taeniopygia guttata tgu-miR-1467-3p mature miRNA
Sequence 58 - UUCACACCAGAGUAACUGAGAGC - 80
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27

  2. PubMed ID: 23268654
    Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
    Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
    BMC Genomics (2012) 13:727