Stem-loop hsa-mir-548ay

Accession

MI0022210

Symbol

HGNC: MIR548AY

Description

Homo sapiens hsa-mir-548ay precursor miRNA

Literature search

56 open access papers mention hsa-mir-548ay
(170 sentences)

Sequence

1617 reads, 16 reads per million, 82 experiments

agaagaugcuuacuacuagguuggugcAAAAGUAAUUGUGGUUUUUGCauuuaaaguaauggcCAAAACCGCGAUUACUCUUGCAcgaaccuaacgguaacacuucu
(((((.((.(((((..((((((.((((((.(((((((((((((((.((..(((...)))..)).))))))))))))))).)))))).))))))..))))))))))))

Structure

     a  c     ac      g      A               U  au   a 
agaag ug uuacu  uagguu gugcAA AGUAAUUGUGGUUUU GC  uua  
||||| || |||||  |||||| |||||| ||||||||||||||| ||  ||| a
ucuuc ac aaugg  auccaa cACGUU UCAUUAGCGCCAAAA cg  aau  
     -  -     ca      g      C               C  gu   g 

Annotation confidence High

Genome context

chr3: 32506283-32506389 [-]

Mature hsa-miR-548ay-5p

• Accession: MIMAT0025452
• Description: Homo sapiens hsa-miR-548ay-5p mature miRNA
• Sequence: 28 - AAAAGUAAUUGUGGUUUUUGC - 48
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548ay-3p

• Accession: MIMAT0025453
• Description: Homo sapiens hsa-miR-548ay-3p mature miRNA
• Sequence: 64 - CAAAACCGCGAUUACUCUUGCA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21807764
   Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
   "Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM"
   "Hum Mol Genet (2011) 20:4025-4040