miRBase entry: hsa-mir-548ay

Stem-loop hsa-mir-548ay


Accession
MI0022210
Symbol
HGNC: MIR548AY
Description
Homo sapiens hsa-mir-548ay precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548ay
(170 sentences)

Sequence

3936 reads, 183 reads per million, 87 experiments
agaagaugcuuacuacuagguuggugcAAAAGUAAUUGUGGUUUUUGCauuuaaaguaauggcCAAAACCGCGAUUACUCUUGCAcgaaccuaacgguaacacuucu
(((((.((.(((((..((((((.((((((.(((((((((((((((.((..(((...)))..)).))))))))))))))).)))))).))))))..))))))))))))

Structure
     a  c     ac      g      A               U  au   a 
agaag ug uuacu  uagguu gugcAA AGUAAUUGUGGUUUU GC  uua  
||||| || |||||  |||||| |||||| ||||||||||||||| ||  ||| a
ucuuc ac aaugg  auccaa cACGUU UCAUUAGCGCCAAAA cg  aau  
     -  -     ca      g      C               C  gu   g 


Annotation confidence High
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Genome context
chr3: 32506283-32506389 [-]

Database links

Mature hsa-miR-548ay-5p

Accession MIMAT0025452
Description Homo sapiens hsa-miR-548ay-5p mature miRNA
Sequence 28 - AAAAGUAAUUGUGGUUUUUGC - 48
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature hsa-miR-548ay-3p

Accession MIMAT0025453
Description Homo sapiens hsa-miR-548ay-3p mature miRNA
Sequence 64 - CAAAACCGCGAUUACUCUUGCA - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21807764
    Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
    "Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM"
    "Hum Mol Genet (2011) 20:4025-4040