miRBase entry: bta-mir-2284z-5

Stem-loop bta-mir-2284z-5


Accession
MI0022338
Description
Bos taurus bta-mir-2284z-5 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2284z-5
(32 sentences)

Sequence

3250 reads, 74 reads per million, 72 experiments
uuggguuggcAAAAAAGUUUGUUUGGGUUUUUucauaacauuuaauggaaaacccaaacaaacauuuaggccaacccaau
((((((((((..(((.((((((((((((((((.(((........))))))))))))))))))).)))..)))))))))).

Structure
-          AA   A                u   aac 
 uuggguuggc  AAA GUUUGUUUGGGUUUUU cau   a
 ||||||||||  ||| |||||||||||||||| |||    
 aacccaaccg  uuu caaacaaacccaaaag gua   u
u          ga   a                -   auu 


Annotation confidence Not enough data
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Genome context
chr5: 43348101-43348180 [+]

Database links

Mature bta-miR-2284z

Accession MIMAT0025559
Description Bos taurus bta-miR-2284z mature miRNA
Sequence 11 - AAAAAAGUUUGUUUGGGUUUUU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026

  2. PubMed ID: 23100578
    Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
    "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
    "J Anim Sci (2013) 91:90-103