Stem-loop sequence mmu-let-7k

Accession

MI0022352 (change log)

Symbol

MGI:Mir7k

Description

Mus musculus let-7k stem-loop

Literature search

396 open access papers mention mmu-let-7k
(1982 sentences)

Stem-loop

   -----------------------------------------------------------------ua  -       -  a   - ua 
5'                                                                    gc cacagcc cu acc c  g
                                                                      || ||||||| || ||| |   
3'                                                                    cg guguugg gg ugg g  c
   cuucauaacaaaacacaacacaacacccuauuuccgagagacacaugauauccaaucaccacucgaa  u       a  a   a uc 

Deep sequencing

7167022 reads, 1.54e+04 reads per million, 110 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr5: 147283189-147283298 [-]
• Overlapping transcripts:

  intergenic

Database links

• MGI:Mir7k
• miRBase Tracker:MI0022352

Mature sequence mmu-let-7k

• Accession: MIMAT0025580
• Sequence: 24 - ugagguaggagguugugug - 42
• Deep sequencing: 7167017 reads, 107 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-let-7k
  • miRDB:mmu-let-7k

References

1. PMID:20605486 "Regulation of microRNA expression and abundance during lymphopoiesis" Kuchen S, Resch W, Yamane A, Kuo N, Li Z, Chakraborty T, Wei L, Laurence A, Yasuda T, Peng S, Hu-Li J, Lu K, Dubois W, Kitamura Y, Charles N, Sun HW, Muljo S, Schwartzberg PL, Paul WE, O'Shea J, Rajewsky K, Casellas R Immunity. 32:828-839(2010).