miRBase entry: mmu-mir-6541

Stem-loop mmu-mir-6541


Accession
MI0022358
Symbol
MGI: Mir6541
Description
Mus musculus mmu-mir-6541 precursor miRNA

Literature search
1 open access papers mention mmu-mir-6541
(1 sentences)

Sequence

3427 reads, 59 reads per million, 37 experiments
aggauuagaaaucuucauacacacaucaacugagagaguccuugccugagcacaagcccuuccuuuugCACAGGCAAGGACUUCUCAAGaaacccaugagauggcugagg
....((((..((((.(((.......((...(((((.((((((((((((.(((.(((......))).))).))))))))))))))))).)).....)))))))..))))..

Structure
agga    aa    u   acacaca  aac     g            a   c   cc 
    uuag  aucu cau       uc   ugaga aguccuugccug gca aag  c
    ||||  |||| |||       ||   ||||| |||||||||||| ||| |||   
    aguc  uaga gua       aG   ACUCU UCAGGAACGGAC Cgu uuc  u
--gg    gg    -   --cccaa  --A     -            A   u   cu 


Annotation confidence Not enough data
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Genome context
chr14: 62865542-62865651 [+]

Database links

Mature mmu-miR-6541

Accession MIMAT0025588
Description Mus musculus mmu-miR-6541 mature miRNA
Sequence 69 - CACAGGCAAGGACUUCUCAAG - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20605486
    Regulation of microRNA expression and abundance during lymphopoiesis
    "Kuchen S, Resch W, Yamane A, Kuo N, Li Z, Chakraborty T, Wei L, Laurence A, Yasuda T, Peng S, Hu-Li J, Lu K, Dubois W, Kitamura Y, Charles N, Sun HW, Muljo S, Schwartzberg PL, Paul WE, O'Shea J, Rajewsky K, Casellas R"
    "Immunity (2010) 32:828-839