miRBase entry: gga-mir-6551

Stem-loop gga-mir-6551


Accession
MI0022369
Description
Gallus gallus gga-mir-6551 precursor miRNA


Sequence

ggugguuuuacuggggaggggagagCGGUGCAUCUCUGCAGCCCGCAugagccaugugcgggagugGGGCUGUGAGAGAUGUUCCCUUucccuucccucuugugccac
.(((((......(((((((((((((.((.(((((((((((((((.(((...((......))..)))))))))).)))))))).))))))))))))))).....)))))

Structure
g     uuuacu             C  U        -       G   gag  au 
 guggu      ggggaggggagag GG GCAUCUCU GCAGCCC CAu   cc  g
 |||||      ||||||||||||| || |||||||| ||||||| |||   ||   
 caccg      ucccuucccuUUC CC UGUAGAGA UGUCGGG gug   gg  u
-     -uguuc             -  U        G       -   -ag  cg 


Annotation confidence Not enough data
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Genome context
chr18: 9400612-9400719 [-]

Database links

Mature gga-miR-6551-5p

Accession MIMAT0025609
Description Gallus gallus gga-miR-6551-5p mature miRNA
Sequence 26 - CGGUGCAUCUCUGCAGCCCGCA - 47
Evidence experimental
Illumina [1]

Mature gga-miR-6551-3p

Accession MIMAT0025610
Description Gallus gallus gga-miR-6551-3p mature miRNA
Sequence 67 - GGGCUGUGAGAGAUGUUCCCUU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227