miRBase entry: gga-mir-6610

Stem-loop gga-mir-6610


Accession
MI0022429
Description
Gallus gallus gga-mir-6610 precursor miRNA


Sequence

3 reads, 0 reads per million, 2 experiments
cagcccuggcucucucgcaugucuccuuucugcaucacagugcaaacacugagcacgagcugUGGGUGGCUUUGGAGAUAUGGAuggugcuugggccuugugcguaugca
..((((.(((.((.((.(((((((((...((((.(((((((((.........))....)))))))))))....))))))))))).)).))).))))....(((....)))

Structure
------------ca    u   u  c  g         -uuu    a       ----  aaa 
              gccc ggc cu uc caugucucc    cugc ucacagu    gc   c
              |||| ||| || || |||||||||    |||| |||||||    ||   a
              cggg ucg gg AG GUAUAGAGG    GGUG GGUgucg    cg   c
acguaugcguguuc    u   u  u  -         UUUC    -       agca  agu 


Annotation confidence Not enough data
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Genome context
chr2: 4915023-4915132 [+]

Database links

Mature gga-miR-6610-3p

Accession MIMAT0025705
Description Gallus gallus gga-miR-6610-3p mature miRNA
Sequence 63 - UGGGUGGCUUUGGAGAUAUGGA - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227