miRBase entry: gga-mir-6611

Stem-loop gga-mir-6611


Accession
MI0022430
Description
Gallus gallus gga-mir-6611 precursor miRNA


Sequence

6 reads, 0 reads per million, 2 experiments
cauuucugcucugguucacaugcuuUGCUGGAUCCAGUGACACUUCAguuuucugcuucaggaagugcugcugaauagagcaggaagugugaaccaacagcagcuagaau
.....(((((.((((((((((..((((((..((.(((((.(((((((((.....)))....)))))).))))).))..))))))..))))))))))..))))).......

Structure
--cauuu     -c          gc      GG  C     A      ----   u 
       cugcu  ugguucacau  uuUGCU  AU CAGUG CACUUC    Agu u
       |||||  ||||||||||  ||||||  || ||||| ||||||    ||| u
       gacga  accaagugug  ggacga  ua gucgu gugaag    ucg c
uaagauc     ca          aa      ga  a     c      gacu   u 


Annotation confidence Not enough data
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Genome context
chr9: 12336436-12336545 [-]

Database links

Mature gga-miR-6611-5p

Accession MIMAT0025706
Description Gallus gallus gga-miR-6611-5p mature miRNA
Sequence 26 - UGCUGGAUCCAGUGACACUUCA - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227