miRBase entry: gga-mir-6615

Stem-loop gga-mir-6615


Accession
MI0022434
Description
Gallus gallus gga-mir-6615 precursor miRNA

Literature search
0 open access papers mention gga-mir-6615
(0 sentences)

Sequence

711 reads, 11 reads per million, 4 experiments
ccugaauuccagacaagacacuggggcUUGGGGACACCAUCAGAACAGCCAcagcugugcuggauucugUGGCACUGAUGUGUUCUCCACAgguccucgugcggacagagc
.(((...(((......(.(((.(((((((((((((((.(((((....(((((((..((.....)).))))))).))))))))))))...)))))))).))))))))))...

Structure
--c   aau   agacaa a   u        ---       C     AACA       cu  g 
   cug   ucc      g cac ggggcUUG   GGGACAC AUCAG    GCCAcag  gu c
   |||   |||      | ||| ||||||||   ||||||| |||||    |||||||  || u
   gac   agg      c gug uccuggAC   UCUUGUG UAGUC    CGGUguc  ua g
cga   ---   ------ -   c        ACC       -     ---A       -u  g 


Annotation confidence Not enough data
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Genome context
chr28: 1760725-1760835 [-]

Database links

Mature gga-miR-6615-5p

Accession MIMAT0025710
Description Gallus gallus gga-miR-6615-5p mature miRNA
Sequence 28 - UUGGGGACACCAUCAGAACAGCCA - 51
Evidence experimental
Illumina [1]

Mature gga-miR-6615-3p

Accession MIMAT0025711
Description Gallus gallus gga-miR-6615-3p mature miRNA
Sequence 70 - UGGCACUGAUGUGUUCUCCACA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227