miRBase entry: gga-mir-6629

Stem-loop gga-mir-6629


Accession
MI0022448
Description
Gallus gallus gga-mir-6629 precursor miRNA


Sequence

12 reads, 0 reads per million, 3 experiments
aucuguggugccagaacagagCUGGGAACUUGAGGCAGCUGUUGAGUgcuaaggaggcuccagcugaucccuguuccucgccucauucugcagcaagguuucaguuggug
((((.((.(((.((((.((.((.((((((..(.((((((((..((((.........)))))))))).)))..)))))).))))..))))))).))))))...........

Structure
-----------    g  g   c    -c  a  U      UU A  -      UU    gcu 
           aucu ug ugc agaa  ag gC GGGAAC  G GG CAGCUG  GAGU   a
           |||| || ||| ||||  || || ||||||  | || ||||||  ||||   a
           ugga ac acg ucuu  uc cg uccuug  c cu gucgac  cucg   g
gugguugacuu    -  g   -    ac  -  c      uc -  a      --    gag 


Annotation confidence Not enough data
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Genome context
chr1: 917736-917845 [+]

Database links

Mature gga-miR-6629-5p

Accession MIMAT0025725
Description Gallus gallus gga-miR-6629-5p mature miRNA
Sequence 22 - CUGGGAACUUGAGGCAGCUGUUGAGU - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227