miRBase entry: gga-mir-6630

Stem-loop gga-mir-6630


Accession
MI0022449
Description
Gallus gallus gga-mir-6630 precursor miRNA


Sequence

cggagcuauguaaaaguagaagcgagguacucaggaaggucagagguagugcagggaggaaacagccucCUGCACAAACCGAAGGCUUUUUguuucucauaccucuuucu
.................(((((.((((((....((((((((...(((.(((((((.(((......))))))))))..)))...))))))))........)))))))))))

Structure
cggagcuauguaaaagu     c      ----cuca        aga   -a       g   aa 
                 agaag gaggua        ggaagguc   ggu  gugcagg agg  a
                 ||||| ||||||        ||||||||   |||  ||||||| |||   
                 ucuuu cuccau        UUUUUCGG   CCA  CACGUCc ucc  c
-----------------     -      acucuuug        AAG   AA       -   ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 129537724-129537833 [-]

Database links

Mature gga-miR-6630-3p

Accession MIMAT0025726
Description Gallus gallus gga-miR-6630-3p mature miRNA
Sequence 70 - CUGCACAAACCGAAGGCUUUUU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227