miRBase entry: gga-mir-6631

Stem-loop gga-mir-6631


Accession
MI0022450
Description
Gallus gallus gga-mir-6631 precursor miRNA

Literature search
1 open access papers mention gga-mir-6631
(3 sentences)

Sequence

54 reads, 2 reads per million, 5 experiments
gaaaauugaagagcugguggGAAGAGAAUGCUGUGGUUCUGCugaggaccugugggccccacagcucucucuccucuuuagcuuucugcaucucaguauguuuguuacuc
....(((((((((((((.(((.(((((..(((((((.(((((.........)))))..)))))))..))))).))).)))))))).......))))).............

Structure
---------gaaa     -------        u   A     AU       -U     uga 
             auuga       agagcugg ggG AGAGA  GCUGUGG  UCUGC   g
             |||||       |||||||| ||| |||||  |||||||  |||||   g
             ugacu       uuucgauu cuc ucucu  cgacacc  gggug   a
cucauuguuugua     cuacguc        u   c     cu       cc     ucc 


Annotation confidence Not enough data
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Genome context
chr3: 12516662-12516771 [+]

Database links

Mature gga-miR-6631-5p

Accession MIMAT0025727
Description Gallus gallus gga-miR-6631-5p mature miRNA
Sequence 21 - GAAGAGAAUGCUGUGGUUCUGC - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227