miRBase entry: gga-mir-6635-1

Stem-loop gga-mir-6635-1


Accession
MI0022454
Description
Gallus gallus gga-mir-6635-1 precursor miRNA
Gene family
MIPF0001632; mir-6635


Sequence

ccucucuugauguccggcuGUGAAGGAUCAGAACAGCGUGCUUggcugaagugcugugcuguuugucuucgcuguuguguggcagaaugcuucuugggugcuugggagca
..........((((((((.(((((((..(((.(((((..((((.....))))))))).)))....))))))).))))...))))...(((((((.((...)).)))))))

Structure
----------------ccucucuuga    ---    u       --AU   A     GU    g 
                          uguc   cggc GUGAAGG    CAG ACAGC  GCUU g
                          ||||   |||| |||||||    ||| |||||  |||| c
                          acgg   guug cgcuucu    guc ugucg  ugaa u
acgaggguucguggguucuucguaag    ugu    u       guuu   g     --    g 


Annotation confidence Not enough data
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Genome context
chr15: 6975427-6975536 [+]

Database links

Mature gga-miR-6635-5p

Accession MIMAT0025731
Description Gallus gallus gga-miR-6635-5p mature miRNA
Sequence 20 - GUGAAGGAUCAGAACAGCGUGCUU - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227