miRBase entry: gga-mir-6637-2

Stem-loop gga-mir-6637-2


Accession
MI0022457
Description
Gallus gallus gga-mir-6637-2 precursor miRNA
Gene family
MIPF0001482; mir-6637


Sequence

cggcgugugggugugagagaggaaggcagcgaaggcugcagggcggucaggcggaggaagccGCUGGGCUGUGCCUGCAAUCGGUgcguugccccuuuaauugugucccc
........(((......(((((..(((((((..((.((((((((((((.(((((......))))).)))))).)))))).))....))))))))))))........))).

Structure
cggcgugu   --ugugag     aa       --aa  c      -      a     ag 
        ggg        agagg  ggcagcg    gg ugcagg gcgguc ggcgg  g
        |||        |||||  |||||||    || |||||| |||||| |||||   
        ccc        uuucc  ccguugc    CU ACGUCC UGUCGG UCGcc  a
-------c   uguguuaa     --       gUGG  A      G      G     ga 


Annotation confidence Not enough data
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Genome context
chr23: 5232873-5232982 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-6637-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-6637-3p

Accession MIMAT0025733
Description Gallus gallus gga-miR-6637-3p mature miRNA
Sequence 63 - GCUGGGCUGUGCCUGCAAUCGGU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227