miRBase entry: gga-mir-6666

Stem-loop gga-mir-6666


Accession
MI0022486
Description
Gallus gallus gga-mir-6666 precursor miRNA


Sequence

15 reads, 0 reads per million, 3 experiments
gagagaacgggaauuuaggggacuccugcacucguucgucccugcgcugugaugcagucugcUCGGGUGAUGAGGACAGGAGGAuuccugaguuuguucuucccagcuau
..((((((..(((((((((((.((((((..(((((.((.(((.(((((((...)))))..))..))))))))))..))))))..))))))))))))))))).........

Structure
-------ga      gg           -a      ca     u  u   -u  --     g 
         gagaac  gaauuuagggg  cuccug  cucgu cg ccc  gc  gcugu  
         ||||||  |||||||||||  ||||||  ||||| || |||  ||  ||||| a
         uucuug  uuugaguccuu  GAGGAC  GAGUA GU GGG  cg  ugacg  
uaucgaccc      --           AG      AG     -  -   CU  uc     u 


Annotation confidence Not enough data
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Genome context
chr28: 4722719-4722828 [+]

Database links

Mature gga-miR-6666-3p

Accession MIMAT0025767
Description Gallus gallus gga-miR-6666-3p mature miRNA
Sequence 63 - UCGGGUGAUGAGGACAGGAGGA - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227