miRBase entry: gga-mir-6684

Stem-loop gga-mir-6684


Accession
MI0022505
Description
Gallus gallus gga-mir-6684 precursor miRNA


Sequence

cagaccagcaucugcucccUUUGCUGCACUGAAGAUGcagugaggugaccacccucagaugcucggcagggcaggcagcaaagcugcagcacaacacagguccccaucag
..(((((((....))).......((((.(((..((.(((.(((((.......)))))..)))))..))).))))(((((...)))))...........))))........

Structure
------ca    -------agcaucugcucccUUUG    A   AA  U   -g     ug 
        gacc                        CUGC CUG  GA Gca  ugagg  a
        ||||                        |||| |||  || |||  |||||  c
        cugg                        gacg gac  cu cgu  acucc  c
gacuaccc    acacaacacgacgucgaaacgacg    g   gg  -   ag     ca 


Annotation confidence Not enough data
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Genome context
chr12: 11108224-11108333 [+]

Database links

Mature gga-miR-6684-5p

Accession MIMAT0025789
Description Gallus gallus gga-miR-6684-5p mature miRNA
Sequence 20 - UUUGCUGCACUGAAGAUG - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227