miRBase entry: gga-mir-6712

Stem-loop gga-mir-6712


Accession
MI0022534
Description
Gallus gallus gga-mir-6712 precursor miRNA


Sequence

gccagcacugugccuucccgacccAGUGGUGGCUGAGAACAGUGACcagcacugcucccucggccaucccacgagcaggaggcucuccuuccugagguugcagcauugcu
...((((..((((.....(((((..((((((((((((..(((((.....)))))....))))))))..))))...(((((((.....))))))).)))))..))))))))

Structure
gcc    cu    cuucc     ---------------------cA    --        --AA     A 
   agca  gugc     cgacc                       GUGG  UGGCUGAG    CAGUG C
   ||||  ||||     |||||                       ||||  ||||||||    ||||| c
   ucgu  uacg     guugg                       cacc  accggcuc    gucac a
---    --    ---ac     aguccuuccucucggaggacgag    cu        ccuc     g 


Annotation confidence Not enough data
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Genome context
chr17: 10000998-10001107 [-]

Database links

Mature gga-miR-6712-5p

Accession MIMAT0025822
Description Gallus gallus gga-miR-6712-5p mature miRNA
Sequence 25 - AGUGGUGGCUGAGAACAGUGAC - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227