miRBase entry: hsa-mir-6790

Stem-loop hsa-mir-6790


Accession
MI0022635
Symbol
HGNC: MIR6790
Description
Homo sapiens hsa-mir-6790 precursor miRNA
Gene family
MIPF0001811; mir-6790


Sequence

19 reads, 6 reads per million, 12 experiments
GUGAGUGUGGAUUUGGCGGGGUUcggggguuccgacggCGACCUCGGCGACCCCUCACUcacc
(((((((.((..(((.((((((((((.....)))).....)))))).)))..)).))))))).

Structure
-       U  AU   G      -----    g 
 GUGAGUG GG  UUG CGGGGU     Ucgg g
 ||||||| ||  ||| ||||||     |||| g
 cacUCAC CC  AGC GCUCCA     agcc u
c       U  CC   G      GCggc    u 


Annotation confidence Not enough data
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Genome context
chr19: 6392921-6392983 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-6790
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-6790-5p

Accession MIMAT0027480
Description Homo sapiens hsa-miR-6790-5p mature miRNA
Sequence 1 - GUGAGUGUGGAUUUGGCGGGGUU - 23
Evidence experimental
meta-analysis [1]

Mature hsa-miR-6790-3p

Accession MIMAT0027481
Description Homo sapiens hsa-miR-6790-3p mature miRNA
Sequence 39 - CGACCUCGGCGACCCCUCACU - 59
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645